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Current  Pharmacogenomics, Volume 1, Number 1, 2003

 

Contents

 

Pharmacogenetics of Selective Serotonin Reuptake Inhibitor Response in Major Depression Pp.1-7

Shih-Jen Tsai  and Chen-Jee Hong

[Abstract] [Full text article]    

 

Apoptosis in Drug Response Pp.9-16

Simone Fulda and Klaus-Michael Debatin

[Abstract] [Full text article]    

 

HLA Peptide-mediated Strategies for Modulation of Cellular and Humoral Immune Response in Transplantation Pp.17-36

A.C. Papassavas

[Abstract] [Full text article]     

 

Genetic Polymorphism and Tumor Immunotherapy Pp.37-57

Rongcun Yang and Richard B.S. Roden

[Abstract] [Full text article]     

 

Genomic and Proteomic Techniques and their Application in Selenium Research Pp. 59-65

Huawei Zeng

[Abstract] [Full text article]     

 

The Genomic Approaches to Major Depression Pp. 67-74

Chen-Jee Hong, and Shih-Jen Tsai

[Abstract] [Full text article]     

 

Abstracts

 

[Back to top] Pharmacogenetics of Selective Serotonin Reuptake Inhibitor Response in Major Depression

Shih-Jen Tsai  and Chen-Jee Hong

[Full text article]

 

As with all antidepressant therapies, there is variability among major depressed patients in terms of response to selective serotonin reuptake inhibitor (SSRI) treatment. Of the factors causing this inter-individual variability in response, differences in genetic components may play a major role. Some very recent research has focused on the associations between genetic polymorphisms in candidate genes related to SSRI therapeutic action. Several genetic polymorphisms have been associated with therapeutic SSRI response, including genetic variants of the serotonin transporter, serotonin- 2A-receptor, tryptophan hydroxylase, brain-derived neurotrophic factor, G-protein beta3 subunit, interleukin-1beta and angiotensin-converting enzyme, however, these positive findings have not been replicated in all studies. In this article, the SSRI pharmacogenetic studies for major depression are reviewed, and recommendations proposed for future study.

 

[Back to top] Apoptosis in Drug Response

Simone Fulda and Klaus-Michael Debatin

[Full text article]

 

Apoptosis, the cell’s intrinsic death program, plays an important role in the regulation of tissue homeostasis. Imbalances between cell death and survival may result in premature death, uncontrolled proliferation or tumor formation. Also, killing of cancer cells by various cytotoxic approaches such as anticancer drugs, g-irradiation, suicide genes or immunotherapy, is predominantly mediated through induction of apoptosis in target cells. Thus, defects in apoptosis programs that suppress cell death can also confer drug resistance. Understanding the molecular events that regulate apoptosis and how tumor cells evade apoptotic deletion have provided a paradigm to link cancer genetics and response to cancer therapy. Insights into the signaling cascades that regulate drug-induced apoptosis provide rational targets for therapeutic interventions. Also, genetic variability in apoptosis regulatory genes found in tumors of individual patients may contribute to variability in drug response. Thus, monitoring expression profiles of apoptosis genes in tumors of individual patients or in response to specific pharmacological agents may serve as predictive markers of drug response.

 

[Back to top] HLA Peptide-mediated Strategies for Modulation of Cellular and Humoral Immune Response in Transplantation

A.C. Papassavas

[Full text article]

 

New insights into the mechanisms of allorecognition (direct and indirect pathways) and the molecular interactions of the T cell receptor (TCR) with the human leukocyte antigen (HLA)-peptide complex on antigen presenting cells (APCs) have stimulated research into peptide-based strategies of immunosuppression. Although direct recognition of allogeneic molecules on APCs of the graft may induce a state of tolerance, the continuous presentation of processed alloantigens by professional APCs of the recipient does not allow the same phenomenon to occur. It has been demonstrated that indirect recognition of allogeneic HLA molecules and spread of the T cell alloreactivity to other epitopes within the allogeneic HLA molecules might play an important role in provoking graft rejection. Tolerance induction to the dominant (immunogenic) donor determinants, achieved by administration of antagonist (nonimmunogenic) synthetic peptide-based treatments, represents a potential effective strategy for blocking indirect alloresponse and ensuring long-term graft survival. On the basis of this knowledge, computer based rational prediction and mapping of the immunogenic and non-immunogenic determinant on HLA molecules presented during the course of transplantation is a powerful and promising strategy. Moreover, design of analogues/antagonists of epitopes critical for normal T cell activation could also be used. Thus, peptides derived from various regions of HLA class I and II molecules and structure-based peptides have demonstrated immunomodulatory effects both in vitro and in vivo. Early downregulation of the antigen specific indirect alloreactivity, using the various strategies discussed in this review, may allow long-term survival of human allografts without the need of HLA-compatibility and without the continuous recipient immunosupression.

 

[Back to top]  Genetic Polymorphism and Tumor Immunotherapy

Rongcun Yang and Richard B.S. Roden

[Full text article]

 

Numerous immunotherapeutic strategies have been tested over the last decade but their success, especially against cancer, has been both varied and unpredictable. Gene polymorphisms in key immunoregulatory molecules may contribute to the heterogeneity in outcome between individuals receiving the same immunotherapeutic treatment. Typically, active cancer immunotherapy aims to redirect or modulate the function of antigen presenting cells (APCs), especially dendritc cells (DCs) that play a critical role in both innate and adaptive immune responses. This includes enhancing the function of APCs by promoting the growth and differentiation of DCs, potentiating T cell activation by improving costimulation and engineering vaccine vectors to significantly enhance the immunogenicity of vaccinogens. Several groups have investigated the functional consequences of polymorphisms in key immunoregulatory moleculesincluding antigen presenting molecules, cytokines and chemokines and their receptors, adhesion and costimulatory molecules, toll-like receptors and intracellular signaling molecules that play a vital role in antigen recognition and the control of adaptive immune responses. This review examines both genetic polymorphisms in these immunoregulatory molecules and their relationship to immunotherapeutic outcome, especially against carcinoma. (175 words)

 

[Back to top] Genomic and Proteomic Techniques and their Application in Selenium Research

Huawei Zeng

[Full text article]

 

Recent revolutionary changes in molecular biology have spawned the disciplines of genomics and proteomics that systematically generate and analyze the information about genomes, gene transcripts, proteins and their functions in a global, comprehensive manner. The applications of these approaches present tremendous opportunities in almost every aspect of bioscience research. One such opportunity concerns selenium, an essential trace element for humans and many other forms of life, which has been associated with reduced cancer risk. Interestingly, the biological activities of selenium as a nutrient, a cancer preventive agent, or even a toxicant, are dependent on the dose and the chemical form of the element. However, the molecular mechanisms by which selenium exerts these effects largely remain unknown. This article outlines the current status of genomic and proteomic techniques and their application in selenium research, particularly as it relates to the prevention of tumorigenesis.

 

[Back to top] The Genomic Approaches to Major Depression

Chen-Jee Hong, and Shih-Jen Tsai

[Full text article]

 

Major depression is a chronic state of depressed mood with significant genetic predisposition. Although a lot of efforts has been tried to localize or associate the genes of major depression, etiological heterogeneity and complexity of this disorder has greatly hold back the use of traditional linkage strategies and candidate gene approaches. Recent advances in high throughput genotyping and microarray techniques have proffered opportunities for comprehensive investigation on genetic alterations and expressions on a scale not previously possible. It has become feasible to find genes with small effect size in major depression using genome-wide association scanning and to identify new pathways or mechanisms of psychopharmacology by the application of functional genomics. In the era of genomic approach to the pathophysiology of major depression, the authors suggest (1) reducing the heterogeneity of major depression by subgrouping the patients according to biological traits such as responses to antidepressant treatments, (2) searching for genes with small effect size using association scanning strategy, genomic control and DNA pooling techniques in genotyping; and (3) developing animal models with genetic vulnerability to major depression by ethylnitrosourea (ENU) mutagenesis technology and efficient behavioral screening tests.